EnhancerDB
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  3. rs116196192[chr17:28059910]
Enhancers that have rs116196192[chr17:28059910]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116196192[chr17:28059910]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28059895 28059915 TP63 JASPAR yes 53755127
chr17 28059904 28059918 PAX6 JASPAR yes 53755128
chr17 28059910 28059921 TFAP2C JASPAR yes 53755129
Genes associated with rs116196192[chr17:28059910], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More