EnhancerDB
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  3. rs116244007[chr1:234626840]
Enhancers that have rs116244007[chr1:234626840]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116244007[chr1:234626840]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234626231 234628484 TEF1 GTRD no Bone (Osteoblast) 21393225
chr1 234626744 234627294 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21393226
chr1 234626759 234627275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21393227
chr1 234626780 234627276 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21393228
chr1 234626798 234627254 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21393229
chr1 234626805 234627995 ZNF274 GTRD no Bone Marrow (K562) 21393230
chr1 234626811 234627215 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21393231
chr1 234626813 234627229 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21393232
chr1 234626814 234627210 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21393233
chr1 234626836 234626845 SRY JASPAR yes 36278079
chr1 234626836 234627186 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21393234
chr1 234626837 234627173 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21393235
Genes associated with rs116244007[chr1:234626840], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More