EnhancerDB
  1. Home
  2. SNP
  3. rs116259838[chr16:4338565]
Enhancers that have rs116259838[chr16:4338565]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116259838[chr16:4338565]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4335970 4340905 TCF7L2 GTRD no Colon (HCT116) 21686304
chr16 4336163 4339441 TCF7L2 GTRD no Colon (HCT116) 21686305
chr16 4336332 4339430 ZNF143 GTRD no Epithelial (MCF-7) 21686308
chr16 4336343 4339415 TCF7L2 GTRD no Colon (HCT116) 21686309
chr16 4336589 4339442 TCF7L2 GTRD no Colon (HCT116) 21686312
chr16 4337135 4338736 ZNF143 GTRD no Epithelial (MCF-7) 21686314
chr16 4337591 4338607 TCF7L2 GTRD no Colon (HCT116) 21686324
chr16 4337733 4339419 TCF7L2 GTRD no Colon (HCT116) 21686325
chr16 4337776 4339093 ZBTB33 GTRD no Brain (SK-N-SH) 21686326
chr16 4337803 4338986 ZNF143 GTRD no Epithelial (MCF-7) 21686327
chr16 4337808 4339299 ZNF143 GTRD no Epithelial (MCF-7) 21686328
chr16 4337978 4338974 ZNF143 GTRD no Epithelial (MCF-7) 21686330
chr16 4338074 4338737 TCF7L2 GTRD no Colon (HCT116) 21686331
chr16 4338124 4339098 ZNF143 GTRD no Epithelial (MCF-7) 21686332
chr16 4338197 4338801 ZNF274 GTRD no Cervix (HeLa-S3) 21686333
chr16 4338252 4338708 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686334
chr16 4338260 4338614 ZNF274 GTRD no Liver (HepG2) 21686335
chr16 4338288 4338585 ZNF274 GTRD no Cervix (HeLa-S3) 21686336
chr16 4338296 4338846 TCF7L2 GTRD no Colon (HCT116) 21686337
chr16 4338304 4338653 ZNF274 GTRD no Cervix (HeLa-S3) 21686338
chr16 4338305 4338698 ZNF143 GTRD no Epithelial (MCF-7) 21686339
chr16 4338322 4338798 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686340
chr16 4338352 4338616 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686341
chr16 4338369 4338833 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686342
chr16 4338374 4338750 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21686343
chr16 4338385 4338785 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686344
chr16 4338397 4338773 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686345
chr16 4338408 4338798 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686346
chr16 4338408 4339058 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686347
chr16 4338414 4338730 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686348
chr16 4338442 4338752 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21686349
chr16 4338443 4338713 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686350
chr16 4338449 4338586 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686351
chr16 4338451 4338711 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686352
chr16 4338459 4338693 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21686353
chr16 4338467 4338694 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21686354
chr16 4338472 4338702 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686355
chr16 4338475 4338671 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21686356
chr16 4338480 4338579 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686357
chr16 4338482 4338665 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686358
chr16 4338487 4338690 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686359
chr16 4338491 4338711 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686360
chr16 4338561 4338572 NFKB1 JASPAR yes 9266869
chr16 4338561 4338574 NFKB1 JASPAR yes 9266870
chr16 4338561 4338574 NFKB2 JASPAR yes 9266871
chr16 4338562 4338572 NFKB1 JASPAR yes 9266872
chr16 4338562 4338573 NFKB1 JASPAR yes 9266873
Genes associated with rs116259838[chr16:4338565], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More