EnhancerDB
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  3. rs116269414[chr1:33450192]
Enhancers that have rs116269414[chr1:33450192]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33442929 33472683 enh216
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
chr1 33450112 33450483 vista1134
VISTA
Transcript factors that have rs116269414[chr1:33450192]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33450181 33450196 RUNX2 JASPAR yes 28019248
chr1 33450181 33450196 RUNX2 JASPAR yes 118269189
chr1 33450185 33450197 ZBTB7A JASPAR yes 28019249
chr1 33450185 33450197 ZBTB7A JASPAR yes 118269190
chr1 33450186 33450205 RFX2 JASPAR yes 28019250
chr1 33450186 33450205 RFX2 JASPAR yes 118269191
chr1 33450188 33450203 RFX5 JASPAR yes 28019251
chr1 33450188 33450203 RFX5 JASPAR yes 118269192
chr1 33450190 33450209 RFX2 JASPAR yes 28019252
chr1 33450190 33450209 RFX2 JASPAR yes 118269193
Genes associated with rs116269414[chr1:33450192], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More