EnhancerDB
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  3. rs116288952[chr6:42283455]
Enhancers that have rs116288952[chr6:42283455]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42275585 42296471 enh9113
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs116288952[chr6:42283455]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42283438 42283458 RREB1 JASPAR yes 101707831
chr6 42283439 42283459 RREB1 JASPAR yes 101707832
chr6 42283440 42283460 RREB1 JASPAR yes 101707834
chr6 42283441 42283461 RREB1 JASPAR yes 101707836
chr6 42283442 42283462 RREB1 JASPAR yes 101707838
chr6 42283444 42283464 RREB1 JASPAR yes 101707843
chr6 42283445 42283455 SP1 JASPAR yes 101707844
chr6 42283445 42283455 ZNF740 JASPAR yes 101707845
chr6 42283446 42283456 SP1 JASPAR yes 101707846
chr6 42283446 42283456 ZNF740 JASPAR yes 101707847
chr6 42283446 42283466 RREB1 JASPAR yes 101707848
chr6 42283447 42283457 SP1 JASPAR yes 101707849
chr6 42283447 42283457 ZNF740 JASPAR yes 101707850
chr6 42283447 42283468 ZNF263 JASPAR yes 101707851
chr6 42283448 42283458 ZNF740 JASPAR yes 101707852
chr6 42283449 42283469 RREB1 JASPAR yes 101707853
chr6 42283450 42283470 RREB1 JASPAR yes 101707854
chr6 42283450 42283471 ZNF263 JASPAR yes 101707855
chr6 42283451 42283461 SP1 JASPAR yes 101707856
Genes associated with rs116288952[chr6:42283455], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More