EnhancerDB
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  3. rs116315993[chr12:52515641]
Enhancers that have rs116315993[chr12:52515641]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs116315993[chr12:52515641]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52513207 52519034 P63 GTRD no Skin (Keratinocyte) 21546171
chr12 52515598 52515958 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546193
chr12 52515630 52515641 CDX2 JASPAR yes 120918976
chr12 52515632 52515641 CDX1 JASPAR yes 120918977
Genes associated with rs116315993[chr12:52515641], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More