EnhancerDB
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  3. rs116336430[chr3:124554093]
Enhancers that have rs116336430[chr3:124554093]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124541185 124560055 enh20881
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr3 124553626 124554125 vista42252
VISTA
Transcript factors that have rs116336430[chr3:124554093]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124553370 124554329 TCF7L2 UCSC Txn Factor no Conserved 108530137
chr3 124553501 124554206 EP300 UCSC Txn Factor no Conserved 108530138
chr3 124553526 124554190 FOSL2 UCSC Txn Factor no Conserved 108530139
chr3 124553715 124554160 CTCF UCSC Txn Factor no Conserved 108530142
chr3 124553778 124554135 BHLHE40 UCSC Txn Factor no Conserved 108530143
chr3 124553806 124554185 TCF12 UCSC Txn Factor no Conserved 108530144
chr3 124553811 124554125 USF2 UCSC Txn Factor no Conserved 108530145
chr3 124553848 124554135 USF1 UCSC Txn Factor no Conserved 108530146
chr3 124553894 124554170 JUND UCSC Txn Factor no Conserved 108530147
chr3 124553932 124554130 BATF UCSC Txn Factor no Conserved 108530148
chr3 124554073 124554094 REST JASPAR yes 5405733
chr3 124554073 124554094 REST JASPAR yes 71043503
chr3 124554074 124554093 REST JASPAR yes 5405734
chr3 124554074 124554093 REST JASPAR yes 71043504
Genes associated with rs116336430[chr3:124554093], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More