EnhancerDB
  1. Home
  2. SNP
  3. rs116347721[chr17:80821462]
Enhancers that have rs116347721[chr17:80821462]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80814305 80837217 enh17458
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Breast Uterus Thyroid Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs116347721[chr17:80821462]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80821282 80821682 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21800855
chr17 80821282 80821682 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108312964
chr17 80821327 80822694 ZNF143 GTRD no Epithelial (MCF-7) 21800856
chr17 80821327 80822694 ZNF143 GTRD no Epithelial (MCF-7) 108312965
chr17 80821327 80822694 ZNF143 GTRD no Epithelial (MCF-7) 108312966
chr17 80821355 80822683 ZNF143 GTRD no Epithelial (MCF-7) 21800857
chr17 80821355 80822683 ZNF143 GTRD no Epithelial (MCF-7) 108312967
chr17 80821355 80822683 ZNF143 GTRD no Epithelial (MCF-7) 108312968
chr17 80821404 80822582 TCF7L2 GTRD no Colon (HCT116) 21800858
chr17 80821404 80822582 TCF7L2 GTRD no Colon (HCT116) 108312969
chr17 80821404 80822582 TCF7L2 GTRD no Colon (HCT116) 108312970
chr17 80821421 80822700 ZNF143 GTRD no Epithelial (MCF-7) 21800859
chr17 80821421 80822700 ZNF143 GTRD no Epithelial (MCF-7) 108312971
chr17 80821421 80822700 ZNF143 GTRD no Epithelial (MCF-7) 108312972
chr17 80821449 80821469 RREB1 JASPAR yes 21323244
chr17 80821449 80821469 RREB1 JASPAR yes 56389137
chr17 80821449 80822641 TCF7L2 GTRD no Colon (HCT116) 21800860
chr17 80821449 80822641 TCF7L2 GTRD no Colon (HCT116) 108312973
chr17 80821449 80822641 TCF7L2 GTRD no Colon (HCT116) 108312974
chr17 80821455 80821474 REST JASPAR yes 21323245
chr17 80821455 80821474 REST JASPAR yes 56389138
Genes associated with rs116347721[chr17:80821462], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More