EnhancerDB
  1. Home
  2. SNP
  3. rs116374656[chr6:88435481]
Enhancers that have rs116374656[chr6:88435481]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116374656[chr6:88435481]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88435069 88435532 RUNX3 UCSC Txn Factor no Conserved 108540934
chr6 88435262 88435578 EBF1 UCSC Txn Factor no Conserved 108540935
chr6 88435477 88435482 GATA2 JASPAR yes 103325347
chr6 88435479 88435485 MZF1 JASPAR yes 103325348
Genes associated with rs116374656[chr6:88435481], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More