EnhancerDB
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  3. rs116379129[chr17:55534841]
Enhancers that have rs116379129[chr17:55534841]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116379129[chr17:55534841]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55534823 55534841 SRF JASPAR yes 54956365
chr17 55534829 55534844 NFYB JASPAR yes 54956370
chr17 55534831 55534847 NFYA JASPAR yes 54956371
chr17 55534832 55534850 NFYA JASPAR yes 54956372
Genes associated with rs116379129[chr17:55534841], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More