EnhancerDB
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  3. rs116399189[chr18:55928008]
Enhancers that have rs116399189[chr18:55928008]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55922865 55949275 enh17739
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs116399189[chr18:55928008]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55927994 55928009 NR2C2 JASPAR yes 110933208
chr18 55927995 55928009 RXRB JASPAR yes 110933209
chr18 55927995 55928009 RXRG JASPAR yes 110933210
chr18 55928002 55928020 RARA JASPAR yes 110933211
Genes associated with rs116399189[chr18:55928008], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More