EnhancerDB
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  3. rs116412143[chr1:181082399]
Enhancers that have rs116412143[chr1:181082399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181061310 181091955 enh12430
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116412143[chr1:181082399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181081748 181082428 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21354733
chr1 181081748 181082428 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107848622
chr1 181081748 181082428 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107848623
chr1 181082066 181082442 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21354739
chr1 181082066 181082442 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107848632
chr1 181082074 181082438 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21354740
chr1 181082074 181082438 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107848633
chr1 181082082 181082402 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354741
chr1 181082082 181082402 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848634
chr1 181082109 181082505 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354742
chr1 181082109 181082505 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848635
chr1 181082156 181082412 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21354743
chr1 181082156 181082412 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107848636
chr1 181082159 181082439 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354744
chr1 181082159 181082439 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848637
chr1 181082165 181082569 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354745
chr1 181082165 181082569 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848638
chr1 181082182 181082412 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21354746
chr1 181082182 181082412 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848639
chr1 181082260 181082490 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21354747
chr1 181082260 181082490 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107848640
chr1 181082266 181082482 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107848642
chr1 181082364 181082660 ZNF274 GTRD no Blood (GM12878) 21354748
chr1 181082364 181082660 ZNF274 GTRD no Blood (GM12878) 107848643
chr1 181082386 181082405 CTCF JASPAR yes 33554366
chr1 181082394 181082399 TFAP2A TRANSFAC yes 33554367
chr1 181082394 181082400 MZF1 JASPAR yes 33554368
Genes associated with rs116412143[chr1:181082399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More