EnhancerDB
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  3. rs116419129[chr14:55577825]
Enhancers that have rs116419129[chr14:55577825]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 55550545 55578795 enh15631
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116419129[chr14:55577825]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 55576825 55577922 ZNF143 GTRD no Epithelial (MCF-7) 21620296
chr14 55576863 55577907 ZNF274 GTRD no Blood (GM12878) 21620297
chr14 55576888 55577825 ZNF143 GTRD no Epithelial (MCF-7) 21620299
chr14 55576936 55577926 ZNF274 GTRD no Blood (GM12878) 21620303
chr14 55577001 55577964 ZNF143 GTRD no Epithelial (MCF-7) 21620309
chr14 55577010 55577864 ZNF143 GTRD no Epithelial (MCF-7) 21620311
chr14 55577020 55577829 P63 GTRD no Skin (Keratinocyte) 21620314
chr14 55577028 55577878 ZNF143 GTRD no Epithelial (MCF-7) 21620316
chr14 55577045 55577906 ZNF143 GTRD no Epithelial (MCF-7) 21620317
chr14 55577813 55577828 FOXA1 JASPAR yes 115531308
chr14 55577825 55577840 HSF1 JASPAR yes 115531309
Genes associated with rs116419129[chr14:55577825], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More