EnhancerDB
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  3. rs116420704[chr6:43667728]
Enhancers that have rs116420704[chr6:43667728]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43661268 43695735 enh9137
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116420704[chr6:43667728]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43667719 43667735 GLIS1 JASPAR yes 101775479
chr6 43667719 43667736 RXRA JASPAR yes 101775480
chr6 43667720 43667730 ZNF740 JASPAR yes 101775481
chr6 43667720 43667734 GLIS2 JASPAR yes 101775482
chr6 43667720 43667734 GLIS3 JASPAR yes 101775483
Genes associated with rs116420704[chr6:43667728], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More