EnhancerDB
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  3. rs11642146[chr16:85236048]
Enhancers that have rs11642146[chr16:85236048]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11642146[chr16:85236048]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85230964 85237139 ZNF274 GTRD no Blood (GM12878) 21720857
chr16 85231788 85239840 TCF7L2 GTRD no Colon (HCT116) 21720868
chr16 85233505 85237815 TCF7L2 GTRD no Colon (HCT116) 21720908
chr16 85233570 85237019 ZNF274 GTRD no Blood (GM12878) 21720912
chr16 85233641 85237669 TCF7L2 GTRD no Colon (HCT116) 21720914
chr16 85233712 85236641 TCF7L2 GTRD no Colon (HCT116) 21720915
chr16 85234078 85238980 TCF7L2 GTRD no Colon (HCT116) 21720936
chr16 85234083 85236653 TCF7L2 GTRD no Colon (HCT116) 21720939
chr16 85234158 85236441 TCF7L2 GTRD no Colon (HCT116) 21720949
chr16 85234215 85236205 ZNF274 GTRD no Bone Marrow (K562) 21720953
chr16 85234284 85236128 ZNF274 GTRD no Bone Marrow (K562) 21720968
chr16 85234305 85236271 ZNF274 GTRD no Bone Marrow (K562) 21720969
chr16 85234362 85236526 TCF7L2 GTRD no Colon (HCT116) 21720978
chr16 85234393 85236355 TCF7L2 GTRD no Colon (HCT116) 21720986
chr16 85234441 85236228 ZNF274 GTRD no Bone Marrow (K562) 21720993
chr16 85234531 85236354 TCF7L2 GTRD no Colon (HCT116) 21721001
chr16 85234582 85236342 TCF7L2 GTRD no Colon (HCT116) 21721006
chr16 85234644 85236299 TCF7L2 GTRD no Colon (HCT116) 21721009
chr16 85234752 85236303 TCF7L2 GTRD no Colon (HCT116) 21721012
chr16 85234990 85236919 ZNF274 GTRD no Blood (GM12878) 21721014
chr16 85234998 85237199 ZNF274 GTRD no Blood (GM12878) 21721015
chr16 85235008 85236141 TCF7L2 GTRD no Colon (HCT116) 21721016
chr16 85235015 85237146 ZNF274 GTRD no Blood (GM12878) 21721017
chr16 85235025 85236588 ZNF274 GTRD no Blood (GM12878) 21721018
chr16 85235060 85236689 ZNF274 GTRD no Blood (GM12878) 21721020
chr16 85235115 85237065 ZNF274 GTRD no Blood (GM12878) 21721023
chr16 85235217 85236167 ZNF274 GTRD no Blood (GM12878) 21721032
chr16 85235224 85236118 ZBTB33 GTRD no Brain (SK-N-SH) 21721033
chr16 85235233 85236096 ZNF274 GTRD no Bone Marrow (K562) 21721034
chr16 85235261 85236111 TCF7L2 GTRD no Colon (HCT116) 21721040
chr16 85235368 85236276 ZNF274 GTRD no Cervix (HeLa-S3) 21721043
chr16 85235429 85236424 ZNF274 GTRD no Bone Marrow (K562) 21721044
chr16 85235510 85236510 ZNF274 GTRD no Blood (GM12878) 21721046
chr16 85235578 85236270 ZNF274 GTRD no Bone Marrow (K562) 21721051
chr16 85235587 85236512 ZNF274 GTRD no Blood (GM12878) 21721052
chr16 85235629 85236141 ZBTB33 GTRD no Brain (SK-N-SH) 21721057
chr16 85235631 85236206 SOX2 GTRD no Neural Stem Cells (H9) 21721058
chr16 85235633 85236048 ZNF274 GTRD no Blood (GM12878) 21721060
chr16 85235638 85236504 ZNF274 GTRD no Blood (GM12878) 21721061
chr16 85235640 85236630 ZNF274 GTRD no Blood (GM12878) 21721062
chr16 85235667 85236518 ZNF274 GTRD no Blood (GM12878) 21721063
chr16 85235774 85236054 ZNF274 GTRD no Bone Marrow (K562) 21721066
chr16 85235850 85237096 ZNF274 GTRD no Blood (GM12878) 21721067
chr16 85235921 85236712 ZNF274 GTRD no Blood (GM12878) 21721068
chr16 85236021 85236606 ZNF274 GTRD no Blood (GM12878) 21721069
chr16 85236034 85236621 ZNF274 GTRD no Blood (GM12878) 21721070
chr16 85236038 85236686 ZNF274 GTRD no Blood (GM12878) 21721071
chr16 85236047 85236051 YY1 TRANSFAC yes 12031889
chr16 85236047 85237047 ZNF143 GTRD no Epithelial (MCF-7) 21721072
Genes associated with rs11642146[chr16:85236048], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More