EnhancerDB
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  3. rs116464380[chr12:120663232]
Enhancers that have rs116464380[chr12:120663232]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 120660005 120685163 enh2636
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116464380[chr12:120663232]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 120663218 120663234 SOX4 JASPAR yes 124155858
chr12 120663219 120663234 SOX21 JASPAR yes 124155859
chr12 120663230 120663241 HOXA10 JASPAR yes 124155860
chr12 120663231 120663240 CDX1 JASPAR yes 124155861
chr12 120663231 120663242 CDX2 JASPAR yes 124155862
Genes associated with rs116464380[chr12:120663232], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More