EnhancerDB
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  3. rs116466385[chr11:12462654]
Enhancers that have rs116466385[chr11:12462654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12449945 12474246 enh13781
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs116466385[chr11:12462654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12462644 12462654 SP1 JASPAR yes 37447045
chr11 12462645 12462655 SP1 JASPAR yes 37447046
chr11 12462647 12462657 MZF1 JASPAR yes 37447048
chr11 12462653 12462668 IRF9 JASPAR yes 37447049
Genes associated with rs116466385[chr11:12462654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More