EnhancerDB
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  3. rs116474748[chr6:44028564]
Enhancers that have rs116474748[chr6:44028564]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116474748[chr6:44028564]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44028555 44028567 TFAP2A JASPAR yes 101819085
chr6 44028555 44028567 TFAP2B JASPAR yes 101819086
chr6 44028555 44028567 TFAP2C JASPAR yes 101819087
chr6 44028556 44028565 TFAP2A JASPAR yes 101819088
chr6 44028561 44028572 TBX20 JASPAR yes 101819089
chr6 44028562 44028570 MGA JASPAR yes 101819090
chr6 44028562 44028570 TBX15 JASPAR yes 101819091
chr6 44028562 44028570 TBX1 JASPAR yes 101819092
chr6 44028562 44028570 TBX4 JASPAR yes 101819093
chr6 44028562 44028570 TBX5 JASPAR yes 101819094
Genes associated with rs116474748[chr6:44028564], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More