EnhancerDB
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  3. rs116491825[chr1:33472299]
Enhancers that have rs116491825[chr1:33472299]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33442929 33472683 enh216
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
Transcript factors that have rs116491825[chr1:33472299]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33472280 33472301 IRF1 JASPAR yes 28022286
chr1 33472284 33472305 IRF1 JASPAR yes 28022287
chr1 33472286 33472301 PRDM1 JASPAR yes 28022288
chr1 33472286 33472301 STAT2 JASPAR yes 28022289
chr1 33472287 33472301 SPIC JASPAR yes 28022290
chr1 33472287 33472301 STAT1 JASPAR yes 28022291
chr1 33472288 33472309 IRF1 JASPAR yes 28022292
chr1 33472289 33472304 FOXP1 JASPAR yes 28022293
chr1 33472290 33472305 STAT2 JASPAR yes 28022294
chr1 33472291 33472306 FOXP1 JASPAR yes 28022295
chr1 33472293 33472308 FOXP1 JASPAR yes 28022296
chr1 33472294 33472309 FOXP1 JASPAR yes 28022297
chr1 33472295 33472310 FOXP1 JASPAR yes 28022298
Genes associated with rs116491825[chr1:33472299], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More