EnhancerDB
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  3. rs116498839[chr6:34631643]
Enhancers that have rs116498839[chr6:34631643]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34618105 34636675 enh9069
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 34631608 34631780 vista51684
VISTA
Transcript factors that have rs116498839[chr6:34631643]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34631628 34631644 ZNF143 JASPAR yes 70351269
chr6 34631628 34631644 ZNF143 JASPAR yes 101230151
chr6 34631638 34631648 TBX21 JASPAR yes 70351270
chr6 34631638 34631648 TBX21 JASPAR yes 101230152
chr6 34631638 34631649 TBX2 JASPAR yes 70351271
chr6 34631638 34631649 TBX2 JASPAR yes 101230153
Genes associated with rs116498839[chr6:34631643], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More