EnhancerDB
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  3. rs116518815[chr6:30785056]
Enhancers that have rs116518815[chr6:30785056]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 30785034 30785335 vista51548
VISTA
Transcript factors that have rs116518815[chr6:30785056]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30784958 30785395 RELA UCSC Txn Factor no Conserved 108539549
chr6 30785043 30785059 SRF JASPAR yes 70344811
chr6 30785043 30785059 SRF JASPAR yes 101054297
chr6 30785050 30785060 MZF1 JASPAR yes 70344812
chr6 30785050 30785060 MZF1 JASPAR yes 101054298
chr6 30785051 30785316 RUNX3 UCSC Txn Factor no Conserved 108539550
Genes associated with rs116518815[chr6:30785056], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More