EnhancerDB
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  3. rs116519076[chr18:55876689]
Enhancers that have rs116519076[chr18:55876689]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55867165 55894619 enh32734
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs116519076[chr18:55876689]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55876673 55876693 RREB1 JASPAR yes 110926830
chr18 55876675 55876695 RREB1 JASPAR yes 110926831
chr18 55876677 55876697 RREB1 JASPAR yes 110926833
chr18 55876680 55876695 NR2C2 JASPAR yes 110926835
chr18 55876683 55876692 SP1 TRANSFAC yes 110926836
chr18 55876684 55876690 SP1 TRANSFAC yes 110926837
chr18 55876684 55876694 SP1 JASPAR yes 110926838
chr18 55876685 55876692 SP1 TRANSFAC yes 110926839
chr18 55876686 55876691 SP1 TRANSFAC yes 110926840
chr18 55876686 55876692 SP1 TRANSFAC yes 110926841
chr18 55876686 55876693 SP1 TRANSFAC yes 110926842
Genes associated with rs116519076[chr18:55876689], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More