EnhancerDB
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  3. rs116519816[chr1:117396815]
Enhancers that have rs116519816[chr1:117396815]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117386845 117406031 enh12189
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs116519816[chr1:117396815]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117396032 117397595 ZNF143 GTRD no Epithelial (MCF-7) 21333947
chr1 117396187 117396837 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333949
chr1 117396379 117396949 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21333959
chr1 117396627 117397543 ZNF143 GTRD no Epithelial (MCF-7) 21333961
chr1 117396660 117397678 ZNF143 GTRD no Epithelial (MCF-7) 21333962
chr1 117396680 117397681 ZNF143 GTRD no Epithelial (MCF-7) 21333963
chr1 117396684 117397690 ZNF143 GTRD no Epithelial (MCF-7) 21333964
chr1 117396763 117397694 ZNF143 GTRD no Epithelial (MCF-7) 21333965
Genes associated with rs116519816[chr1:117396815], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More