EnhancerDB
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  3. rs116523102[chr17:56002624]
Enhancers that have rs116523102[chr17:56002624]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116523102[chr17:56002624]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56002611 56002625 PLAG1 JASPAR yes 55000135
chr17 56002611 56002626 NR2C2 JASPAR yes 55000136
chr17 56002612 56002626 PLAG1 JASPAR yes 55000137
Genes associated with rs116523102[chr17:56002624], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More