EnhancerDB
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  3. rs11652616[chr17:48978368]
Enhancers that have rs11652616[chr17:48978368]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11652616[chr17:48978368]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48978357 48978373 GLIS1 JASPAR yes 54731169
chr17 48978358 48978372 GLIS2 JASPAR yes 54731170
chr17 48978360 48978380 RREB1 JASPAR yes 54731171
chr17 48978362 48978382 RREB1 JASPAR yes 54731172
Genes associated with rs11652616[chr17:48978368], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 48939584 48945339 - TOB1 ENSG00000141232.4 48945339 33029 Breast 0.420159 16046