EnhancerDB
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  3. rs116527875[chr5:77808240]
Enhancers that have rs116527875[chr5:77808240]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116527875[chr5:77808240]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77808230 77808244 POU1F1 JASPAR yes 63594811
chr5 77808231 77808243 POU3F1 JASPAR yes 63594812
chr5 77808231 77808243 POU3F2 JASPAR yes 63594813
chr5 77808231 77808244 POU3F3 JASPAR yes 63594814
chr5 77808232 77808244 POU2F1 JASPAR yes 63594815
chr5 77808233 77808242 POU3F4 JASPAR yes 63594816
chr5 77808233 77808242 POU5F1B JASPAR yes 63594817
chr5 77808234 77808248 TLX1 JASPAR yes 63594818
Genes associated with rs116527875[chr5:77808240], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More