EnhancerDB
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  3. rs116528407[chr1:10573043]
Enhancers that have rs116528407[chr1:10573043]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10562245 10593475 enh59
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116528407[chr1:10573043]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10573030 10573050 ESR1 JASPAR yes 26719487
chr1 10573034 10573051 ESR1 JASPAR yes 26719488
chr1 10573035 10573050 ESR2 JASPAR yes 26719489
chr1 10573035 10573055 ESR1 JASPAR yes 26719490
chr1 10573039 10573044 MYC TRANSFAC yes 26719491
Genes associated with rs116528407[chr1:10573043], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More