EnhancerDB
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  3. rs11652914[chr17:2798543]
Enhancers that have rs11652914[chr17:2798543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs11652914[chr17:2798543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2795210 2800120 ZNF143 GTRD no Epithelial (MCF-7) 21739739
chr17 2795210 2800120 ZNF143 GTRD no Epithelial (MCF-7) 108231314
chr17 2795895 2799236 TCF7L2 GTRD no Colon (HCT116) 21739754
chr17 2795895 2799236 TCF7L2 GTRD no Colon (HCT116) 108231342
chr17 2798532 2798546 PLAG1 JASPAR yes 52783695
chr17 2798534 2798546 TFAP2A JASPAR yes 52783696
chr17 2798534 2798546 TFAP2B JASPAR yes 52783697
chr17 2798534 2798546 TFAP2C JASPAR yes 52783698
chr17 2798534 2798547 TFAP2A JASPAR yes 52783699
chr17 2798534 2798547 TFAP2B JASPAR yes 52783700
chr17 2798534 2798547 TFAP2C JASPAR yes 52783701
chr17 2798534 2798549 TFAP2A JASPAR yes 52783702
chr17 2798542 2798547 SP1 TRANSFAC yes 52783703
chr17 2798542 2798556 PLAG1 JASPAR yes 52783704
Genes associated with rs11652914[chr17:2798543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More