EnhancerDB
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  3. rs116533609[chr17:57433706]
Enhancers that have rs116533609[chr17:57433706]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57433402 57461748 enh17258
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs116533609[chr17:57433706]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57430101 57434473 ZNF143 GTRD no Epithelial (MCF-7) 21774768
chr17 57430101 57434473 ZNF143 GTRD no Epithelial (MCF-7) 21774769
chr17 57430101 57434473 ZNF143 GTRD no Epithelial (MCF-7) 108275799
chr17 57433702 57433719 RARA JASPAR yes 55051523
chr17 57433704 57433719 HNF4G JASPAR yes 55051524
chr17 57433705 57433710 GATA2 JASPAR yes 55051525
chr17 57433705 57433720 HNF4A JASPAR yes 55051526
Genes associated with rs116533609[chr17:57433706], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More