EnhancerDB
  1. Home
  2. SNP
  3. rs116560052[chr1:224027096]
Enhancers that have rs116560052[chr1:224027096]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224017164 224031755 enh12713
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116560052[chr1:224027096]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224027090 224027096 MAZ TRANSFAC yes 35678916
chr1 224027090 224027101 E2F6 JASPAR yes 35678917
chr1 224027094 224027099 ETS2 TRANSFAC yes 35678918
Genes associated with rs116560052[chr1:224027096], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More