EnhancerDB
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  3. rs116564282[chr12:52515176]
Enhancers that have rs116564282[chr12:52515176]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs116564282[chr12:52515176]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52513207 52519034 P63 GTRD no Skin (Keratinocyte) 21546171
chr12 52513239 52515430 P63 GTRD no Skin (Keratinocyte) 21546177
chr12 52513384 52515273 P63 GTRD no Skin (Keratinocyte) 21546181
chr12 52515172 52515182 SP1 JASPAR yes 120918911
chr12 52515173 52515183 SP1 JASPAR yes 120918912
chr12 52515175 52515181 NFE2 TRANSFAC yes 120918913
chr12 52515176 52515188 TFAP2A JASPAR yes 120918914
chr12 52515176 52515188 TFAP2B JASPAR yes 120918915
chr12 52515176 52515188 TFAP2C JASPAR yes 120918916
Genes associated with rs116564282[chr12:52515176], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More