EnhancerDB
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  3. rs116566525[chr1:244483239]
Enhancers that have rs116566525[chr1:244483239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 244477784 244495570 enh12850
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Thyroid Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
chr1 244482749 244483387 vista5890
VISTA
Transcript factors that have rs116566525[chr1:244483239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 244482706 244483390 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405381
chr1 244482706 244483390 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888399
chr1 244482722 244483312 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405383
chr1 244482722 244483312 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888401
chr1 244482781 244483377 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405386
chr1 244482781 244483377 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888404
chr1 244482807 244483327 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405387
chr1 244482807 244483327 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888405
chr1 244482821 244483277 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21405388
chr1 244482821 244483277 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107888406
chr1 244482832 244483242 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405389
chr1 244482832 244483242 YY1 UCSC Txn Factor no Conserved 107888407
chr1 244482832 244483242 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888408
chr1 244482847 244483347 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405391
chr1 244482847 244483347 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888410
chr1 244482872 244483272 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405393
chr1 244482872 244483272 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888412
chr1 244482876 244483312 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405394
chr1 244482876 244483312 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888413
chr1 244482906 244483270 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405396
chr1 244482906 244483270 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888416
chr1 244482914 244483243 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405398
chr1 244482914 244483243 RUNX3 UCSC Txn Factor no Conserved 107888418
chr1 244482914 244483243 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888419
chr1 244482914 244483266 CEBPB UCSC Txn Factor no Conserved 107888420
chr1 244482923 244483333 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405399
chr1 244482923 244483333 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888421
chr1 244482944 244483241 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405400
chr1 244482944 244483241 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888422
chr1 244483016 244483252 FOS UCSC Txn Factor no Conserved 107888424
chr1 244483054 244483438 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405402
chr1 244483054 244483438 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888425
chr1 244483112 244483432 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405403
chr1 244483112 244483432 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888426
chr1 244483141 244483461 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405404
chr1 244483141 244483461 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888427
chr1 244483214 244483450 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405405
chr1 244483214 244483450 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107888428
chr1 244483234 244483249 TFAP2A JASPAR yes 36727046
chr1 244483234 244483249 TFAP2C JASPAR yes 36727047
chr1 244483234 244483249 TFAP2A JASPAR yes 118497982
chr1 244483234 244483249 TFAP2C JASPAR yes 118497983
Genes associated with rs116566525[chr1:244483239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More