EnhancerDB
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  3. rs116568090[chr16:25011891]
Enhancers that have rs116568090[chr16:25011891]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116568090[chr16:25011891]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25011877 25011896 RFX2 JASPAR yes 10094362
chr16 25011884 25011899 ZIC3 JASPAR yes 10094363
chr16 25011884 25011899 ZIC4 JASPAR yes 10094364
chr16 25011885 25011899 ZIC1 JASPAR yes 10094365
chr16 25011886 25011902 GLIS1 JASPAR yes 10094366
chr16 25011889 25011899 ZNF740 JASPAR yes 10094367
Genes associated with rs116568090[chr16:25011891], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More