EnhancerDB
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  3. rs116571278[chr1:168461089]
Enhancers that have rs116571278[chr1:168461089]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs116571278[chr1:168461089]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168460947 168461327 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21348393
chr1 168461017 168461307 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21348394
chr1 168461077 168461092 HNF4A JASPAR yes 32931830
chr1 168461078 168461093 HNF4G JASPAR yes 32931831
Genes associated with rs116571278[chr1:168461089], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More