EnhancerDB
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  3. rs116603935[chr1:172330348]
Enhancers that have rs116603935[chr1:172330348]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116603935[chr1:172330348]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172330338 172330348 MZF1 JASPAR yes 33126238
chr1 172330345 172330360 PRDM1 JASPAR yes 33126240
Genes associated with rs116603935[chr1:172330348], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More