EnhancerDB
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  3. rs116604059[chr5:172288133]
Enhancers that have rs116604059[chr5:172288133]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116604059[chr5:172288133]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172288121 172288133 PKNOX2 JASPAR yes 67835898
chr5 172288127 172288133 NFE2 TRANSFAC yes 67835901
chr5 172288130 172288136 SP1 TRANSFAC yes 67835902
Genes associated with rs116604059[chr5:172288133], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More