EnhancerDB
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  3. rs116604976[chr1:181072559]
Enhancers that have rs116604976[chr1:181072559]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181061310 181091955 enh12430
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116604976[chr1:181072559]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181072553 181072559 TCF4 TRANSFAC yes 33553032
Genes associated with rs116604976[chr1:181072559], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 180601140 180859387 + XPR1 ENSG00000143324.9 180601140 213172 Breast 0.255561 1620
chr1 180123969 180173165 + QSOX1 ENSG00000116260.12 180123969 899394 Ovary 0.5832 1617