EnhancerDB
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  3. rs116611952[chr17:65395729]
Enhancers that have rs116611952[chr17:65395729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65392925 65424130 enh17321
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs116611952[chr17:65395729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65394457 65396122 ZNF143 GTRD no Epithelial (MCF-7) 21782151
chr17 65394457 65396122 ZNF143 GTRD no Epithelial (MCF-7) 108285761
chr17 65394521 65395926 ZNF143 GTRD no Epithelial (MCF-7) 21782152
chr17 65394521 65395926 ZNF143 GTRD no Epithelial (MCF-7) 108285762
chr17 65394591 65395994 ZNF143 GTRD no Epithelial (MCF-7) 21782154
chr17 65394591 65395994 ZNF143 GTRD no Epithelial (MCF-7) 108285764
chr17 65395717 65395738 IRF1 JASPAR yes 55498102
chr17 65395719 65395734 IRF9 JASPAR yes 55498103
chr17 65395720 65395734 IRF7 JASPAR yes 55498104
chr17 65395720 65395734 IRF8 JASPAR yes 55498105
chr17 65395721 65395735 STAT1 JASPAR yes 55498106
chr17 65395721 65395736 PRDM1 JASPAR yes 55498107
chr17 65395721 65395736 STAT2 JASPAR yes 55498108
chr17 65395722 65395734 IRF1 JASPAR yes 55498109
chr17 65395729 65395739 TEAD1 JASPAR yes 55498110
chr17 65395729 65395739 TEAD4 JASPAR yes 55498111
Genes associated with rs116611952[chr17:65395729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More