EnhancerDB
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  3. rs116617340[chr1:203526158]
Enhancers that have rs116617340[chr1:203526158]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203511661 203530955 enh12558
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs116617340[chr1:203526158]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203525818 203527651 ZNF274 GTRD no Cervix (HeLa-S3) 21369490
chr1 203525818 203527651 ZNF274 GTRD no Cervix (HeLa-S3) 107859069
chr1 203525818 203527651 ZNF274 GTRD no Cervix (HeLa-S3) 107859070
chr1 203525906 203527582 ZNF274 GTRD no Cervix (HeLa-S3) 21369491
chr1 203525906 203527582 ZNF274 GTRD no Cervix (HeLa-S3) 107859071
chr1 203525911 203528089 ZNF143 GTRD no Epithelial (MCF-7) 107859072
chr1 203525927 203527340 ZNF143 GTRD no Epithelial (MCF-7) 107859073
chr1 203525931 203527248 ZNF143 GTRD no Epithelial (MCF-7) 107859074
chr1 203525956 203527384 ZNF274 GTRD no Cervix (HeLa-S3) 21369492
chr1 203525956 203527384 ZNF274 GTRD no Cervix (HeLa-S3) 107859075
Genes associated with rs116617340[chr1:203526158], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More