EnhancerDB
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  3. rs116617477[chr15:55508679]
Enhancers that have rs116617477[chr15:55508679]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 55507525 55515978 enh3597
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs116617477[chr15:55508679]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 55508662 55508679 ESR1 JASPAR yes 23493374
chr15 55508667 55508684 PAX9 JASPAR yes 23493375
chr15 55508679 55508684 SP1 TRANSFAC yes 23493376
Genes associated with rs116617477[chr15:55508679], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More