EnhancerDB
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  3. rs116624529[chr1:173371132]
Enhancers that have rs116624529[chr1:173371132]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs116624529[chr1:173371132]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173371119 173371133 IRF7 JASPAR yes 33195272
chr1 173371119 173371133 IRF8 JASPAR yes 33195273
chr1 173371119 173371134 IRF9 JASPAR yes 33195274
chr1 173371121 173371142 IRF1 JASPAR yes 33195276
chr1 173371123 173371138 STAT2 JASPAR yes 33195277
chr1 173371124 173371138 STAT1 JASPAR yes 33195278
chr1 173371132 173371136 YY1 TRANSFAC yes 33195279
Genes associated with rs116624529[chr1:173371132], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More