EnhancerDB
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  3. rs116625281[chr1:27987559]
Enhancers that have rs116625281[chr1:27987559]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116625281[chr1:27987559]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27987552 27987561 SNAI2 JASPAR yes 27719981
chr1 27987552 27987562 TCF4 JASPAR yes 27719982
chr1 27987553 27987573 RREB1 JASPAR yes 27719983
chr1 27987554 27987563 ZEB1 JASPAR yes 27719984
chr1 27987556 27987561 SP1 TRANSFAC yes 27719985
Genes associated with rs116625281[chr1:27987559], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More