EnhancerDB
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  3. rs116643574[chr1:234682228]
Enhancers that have rs116643574[chr1:234682228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116643574[chr1:234682228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234681702 234682716 ZNF274 GTRD no Bone Marrow (K562) 21394315
chr1 234681849 234682229 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21394326
chr1 234681861 234682620 ZNF274 GTRD no Bone Marrow (K562) 21394327
chr1 234682217 234682232 JUND JASPAR yes 36286692
chr1 234682218 234682231 JUN JASPAR yes 36286693
chr1 234682221 234682232 CEBPB JASPAR yes 36286694
chr1 234682221 234682234 DUXA JASPAR yes 36286695
chr1 234682222 234682240 NFYA JASPAR yes 36286696
Genes associated with rs116643574[chr1:234682228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More