EnhancerDB
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  3. rs116649654[chr6:11219070]
Enhancers that have rs116649654[chr6:11219070]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116649654[chr6:11219070]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11219053 11219073 TP63 JASPAR yes 99865739
chr6 11219067 11219073 NFE2 TRANSFAC yes 99865741
chr6 11219070 11219076 SP1 TRANSFAC yes 99865742
Genes associated with rs116649654[chr6:11219070], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More