EnhancerDB
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  3. rs116662978[chr5:14182742]
Enhancers that have rs116662978[chr5:14182742]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 14142745 14193315 enh22052
Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116662978[chr5:14182742]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 14182739 14182755 POU4F2 JASPAR yes 61020336
chr5 14182739 14182755 POU4F3 JASPAR yes 61020337
chr5 14182741 14182745 YY1 TRANSFAC yes 61020338
chr5 14182741 14182755 POU4F1 JASPAR yes 61020339
chr5 14182741 14182756 HNF1A JASPAR yes 61020340
chr5 14182742 14182752 LHX6 JASPAR yes 61020341
chr5 14182742 14182752 MNX1 JASPAR yes 61020342
chr5 14182742 14182752 POU6F1 JASPAR yes 61020343
chr5 14182742 14182755 HNF1B JASPAR yes 61020344
Genes associated with rs116662978[chr5:14182742], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More