EnhancerDB
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  3. rs116667465[chr5:172278540]
Enhancers that have rs116667465[chr5:172278540]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116667465[chr5:172278540]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172278536 172278540 H1TF2 TRANSFAC yes 67834743
chr5 172278536 172278540 NFE TRANSFAC yes 67834744
chr5 172278536 172278540 SRF TRANSFAC yes 67834745
Genes associated with rs116667465[chr5:172278540], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More