EnhancerDB
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  3. rs116667767[chr1:234668734]
Enhancers that have rs116667767[chr1:234668734]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116667767[chr1:234668734]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234667737 234668977 ZNF143 GTRD no Epithelial (MCF-7) 21394101
chr1 234667737 234668977 ZNF143 GTRD no Epithelial (MCF-7) 107880339
chr1 234667737 234668977 ZNF143 GTRD no Epithelial (MCF-7) 107880340
chr1 234667876 234668876 ZNF143 GTRD no Epithelial (MCF-7) 21394102
chr1 234667876 234668876 ZNF143 GTRD no Epithelial (MCF-7) 107880341
chr1 234667876 234668876 ZNF143 GTRD no Epithelial (MCF-7) 107880342
chr1 234667896 234668771 ZNF143 GTRD no Epithelial (MCF-7) 21394103
chr1 234667896 234668771 ZNF143 GTRD no Epithelial (MCF-7) 107880343
chr1 234668014 234668933 ZNF143 GTRD no Epithelial (MCF-7) 21394104
chr1 234668014 234668933 ZNF143 GTRD no Epithelial (MCF-7) 107880344
chr1 234668014 234668933 ZNF143 GTRD no Epithelial (MCF-7) 107880345
chr1 234668046 234668793 ZNF143 GTRD no Epithelial (MCF-7) 21394108
chr1 234668046 234668793 ZNF143 GTRD no Epithelial (MCF-7) 107880349
chr1 234668048 234668770 ZNF143 GTRD no Epithelial (MCF-7) 21394109
chr1 234668048 234668770 ZNF143 GTRD no Epithelial (MCF-7) 107880350
chr1 234668096 234668792 ZNF143 GTRD no Epithelial (MCF-7) 21394114
chr1 234668096 234668792 ZNF143 GTRD no Epithelial (MCF-7) 107880355
chr1 234668483 234668943 ZNF274 GTRD no Bone Marrow (K562) 21394124
chr1 234668483 234668943 ZNF274 GTRD no Bone Marrow (K562) 107880365
chr1 234668483 234668943 ZNF274 GTRD no Bone Marrow (K562) 107880366
chr1 234668730 234668748 NFYA JASPAR yes 36284757
chr1 234668733 234668749 NFYA JASPAR yes 36284758
chr1 234668734 234668744 HOXA13 JASPAR yes 36284759
Genes associated with rs116667767[chr1:234668734], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More