EnhancerDB
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  3. rs116735853[chr1:52089016]
Enhancers that have rs116735853[chr1:52089016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52082245 52099655 enh11847
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs116735853[chr1:52089016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52089005 52089021 SOX4 JASPAR yes 28855383
chr1 52089006 52089021 SOX21 JASPAR yes 28855384
chr1 52089006 52089022 SOX4 JASPAR yes 28855385
chr1 52089007 52089018 ESRRA JASPAR yes 28855386
chr1 52089007 52089018 ESRRB JASPAR yes 28855387
chr1 52089009 52089017 NR4A2 JASPAR yes 28855388
Genes associated with rs116735853[chr1:52089016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More