EnhancerDB
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  3. rs116740556[chr12:65076581]
Enhancers that have rs116740556[chr12:65076581]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 65076423 65076649 vista13806
VISTA
Transcript factors that have rs116740556[chr12:65076581]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65076321 65076765 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21552918
chr12 65076321 65076765 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108041937
chr12 65076492 65076638 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21552919
chr12 65076492 65076638 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108041938
chr12 65076567 65076582 JUND JASPAR yes 82422870
chr12 65076567 65076582 JUND JASPAR yes 121425991
chr12 65076567 65076584 ZNF410 JASPAR yes 82422871
chr12 65076567 65076584 ZNF410 JASPAR yes 121425992
chr12 65076571 65076581 SREBF1 JASPAR yes 82422872
chr12 65076571 65076581 SREBF2 JASPAR yes 82422873
chr12 65076571 65076581 SREBF1 JASPAR yes 121425993
chr12 65076571 65076581 SREBF2 JASPAR yes 121425994
chr12 65076581 65076594 SMAD2 JASPAR yes 82422874
chr12 65076581 65076594 SMAD2 JASPAR yes 121425995
Genes associated with rs116740556[chr12:65076581], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More