EnhancerDB
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  3. rs116747533[chr5:172276930]
Enhancers that have rs116747533[chr5:172276930]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116747533[chr5:172276930]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172276928 172276943 MEF2C JASPAR yes 67834490
chr5 172276929 172276944 MEF2A JASPAR yes 67834491
chr5 172276930 172276942 MEF2A JASPAR yes 67834492
chr5 172276930 172276942 MEF2B JASPAR yes 67834493
chr5 172276930 172276942 MEF2D JASPAR yes 67834494
Genes associated with rs116747533[chr5:172276930], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More